Finding the unloaded geometry

Finding the unloaded geometryΒΆ

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2022-11-26 21:03:09,946 [849] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2022-11-26 21:03:10,119 [849] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2022-11-26 21:03:10,125 [849] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-11-26 21:03:10,126 [849] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2022-11-26 21:03:10,126 [849] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-11-26 21:03:10,129 [849] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2022-11-26 21:03:10,182 [849] INFO     pulse.unloader: 
Do an intial solve
2022-11-26 21:04:46,240 [849] INFO     pulse.unloader: 
Iteration: 0
2022-11-26 21:04:51,392 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-11-26 21:04:51,446 [849] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-11-26 21:04:57,364 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:57,369 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-11-26 21:04:57,426 [849] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-11-26 21:04:57,950 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:58,011 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:58,012 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:58,072 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:58,073 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:04:58,128 [849] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2022-11-26 21:06:34,571 [849] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2022-11-26 21:06:34,814 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,815 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,875 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,876 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,936 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,938 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:34,992 [849] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2022-11-26 21:06:35,007 [849] INFO     pulse.unloader: 
Residual:	0.011328623428538177
2022-11-26 21:06:35,008 [849] INFO     pulse.unloader: 
Iteration: 1
2022-11-26 21:06:35,248 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,250 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,309 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,310 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,370 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,371 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:35,426 [849] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2022-11-26 21:06:41,017 [849] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2022-11-26 21:06:41,257 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,258 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,318 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,320 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,380 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,381 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,437 [849] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2022-11-26 21:06:41,453 [849] INFO     pulse.unloader: 
Residual:	0.0016980102145400953
2022-11-26 21:06:41,453 [849] INFO     pulse.unloader: 
Iteration: 2
2022-11-26 21:06:41,695 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,697 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,756 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,757 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,816 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,817 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:41,871 [849] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2022-11-26 21:06:47,456 [849] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2022-11-26 21:06:47,697 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,698 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,759 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,760 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,819 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,821 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:47,875 [849] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2022-11-26 21:06:47,890 [849] INFO     pulse.unloader: 
Residual:	0.00025928769312991075
2022-11-26 21:06:47,891 [849] INFO     pulse.unloader: 
Iteration: 3
2022-11-26 21:06:48,132 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,133 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,193 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,194 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,254 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,255 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:48,309 [849] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2022-11-26 21:06:53,881 [849] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2022-11-26 21:06:54,122 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,123 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,183 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,184 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,244 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,246 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,301 [849] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2022-11-26 21:06:54,316 [849] INFO     pulse.unloader: 
Residual:	3.931304295911353e-05
2022-11-26 21:06:54,318 [849] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2022-11-26 21:06:54,549 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,550 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,610 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,611 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,671 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-11-26 21:06:54,672 [849] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()